Here’s a rolling analysis that I will keep up-to-date and refreshed throughout the academic. The analysis relies on data from the NYT to track the pandemic throughout the United States. Please note that I am not an epidemiologist, and I do not guarantee the accuracy of any of these results. Please also note that these analyses should NOT be used to draw firm conclusions. For that, I defer to Trevor Bedford, Carl Bergstrom or the Nextstrain team.
PD: Updates have been terminated because the pandemicis now under control.