Are overfitted models useful?

A thought experiment on the utility of overfitted models in biological research. Read More

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David
01 August 2024

Is your company's computational biology deck unique?

Why do all the biotech companies have the same computational biology deck? Read More

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David
03 July 2024

Stop recommending single-cell RNA-seq, recommend bulk RNA-seq!

I have realized that people are fascinated with single-cell RNA-seq, but increasingly I would like to see us develop methods that augment bulk RNA-seq to allow us to get the same information at lower cost. Read More

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David
02 July 2024

Why I love PCA for AI

Some thoughts on why I think linear methods like PCA are more important than ever in an ML world Read More

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David
01 July 2024

Hyperparameter tuning and ChatGPT's first failure mode!

An exploration of hyperparameter tuning and prompt engineering with ChatGPT Read More

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David
22 May 2023

A toy Neural Network and an introduction to Tensorflow

I wanted to take a dive into companion coding using ChatGPT, so I asked it to help me write a blog post on an introduction to ML methods in python, specifically, I wanted to build a Neural Network using tensorflow to analyze a toy dataset (I even let Chat pick the dataset!). Read More

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David
21 May 2023